A connectome in the mouse visual cortex covering all the layers

Resources

Access

EM Images: s3://bossdb-open-data/iarpa_microns/basil/em

Segmentation/Meshes/Skeletons: s3://bossdb-open-data/iarpa_microns/basil/seg/

Synaptic Clefts: s3://bossdb-open-data/iarpa_microns/basil/clefts/

Nuclei: s3://bossdb-open-data/iarpa_microns/basil/nuclei/

Connectome Graph: https://bossdb-open-data.s3.amazonaws.com/iarpa_microns/basil/synapse_graph/cleaned_final.csv.gz

Co-registration: Nuno Maçarico da Costa, Adam Bleckert, Marc Takeno

Tissue Preparation: Joann Buchanan, Marc Takeno, Nuno Maçarico da Costa

Sectioning: Agnes Bodor, Adam Bleckert

TEM Design and Maintenance: Derrick Brittain, Clay Reid

TEM Operation: Derrick Brittain, Wenjing Yin, Adam Bleckert, Marc Takeno, Daniel Bumbarger, Nuno Da Costa

EM Stitching and Rough Alignment: Gayathri Mahalingam, Russel Torres, Yang Li, Thomas Macrina, Dodam Ih

EM Fine Alignment: Thomas Macrina, Will Wong

Neuron segmentation: Kisuk Lee, Jingpeng Wu

Agglomeration: Ran Lu

Synapse Detection: Nicholas Turner, Jingpeng Wu

Neuroglancer Frontend: Nico Kemnitz, Manuel Castro

Proofreading Backend: Sven Dorkenwald, Nico Kemnitz, Chris S. Jordan

Cloud Data Interface: William Silversmith, Ignacio Tartavull

Connectome Versioning System: Forrest Collman, Sven Dorkenwald, Casey Schneider Mizell

Proofreading: Agnes Bodor, Nuno Maçarico da Costa, Szi-Chieh Yu, Alyssa Wilson, Sven Dorkenwald, Casey Schneider-Mizell, Forrest Collman

Project Management: Lynne Becker, Shelby Suckow

Scientific Management: Clay Reid, Nuno Da Costa, Andreas S. Tolias, Jacob Reimer, H. Sebastian Seung

IARPA MICrONS Program Management: David A. Markowitz, Jacob Vogelstein

Under preparation